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Fig. 3 | BMC Bioinformatics

Fig. 3

From: MethylSeqLogo: DNA methylation smart sequence logos

Fig. 3

MethylSeqLogos (top) and MethylScape(s) (bottom) of c-Myc binding sites in H1-hESC cells (left) and ZBTB33 binding sites in HepG2 cells (right). Logos in rows marked with WG show information for all binding sites relative to a whole genome (WG) background model, while logos in rows marked with PR show information for promoter region binding sites relative to a promoter region (PR) background model. The three columns in a MethylScape logo represent the contexts: CpG, CHG, and CHH; with faint background color in the middle row representing the background model methylation probability for each respective context

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